RNA Bioscience Initiative (RBI)'s repositories
nihexporter
An R data package for NIH EXPORTER data
clustifyrdatahub
External single-cell mRNA sequencing data sets for use with clustifyr
spatialshiny
Browser for Spatial Transcriptomics, built on R Shiny
bmsc-7810-pbda
BMSC 7810: Practical biological data analysis with R/RStudio
deepsort-rs
sort demultiplexed reads based on deeplexicon outputs
detectrms-rs
Fast detection of rna modifications sites
fuzzyfastq-rs
Rust implementation of fuzzy matching of sequences in FASTQ files
gene_model_plot
Python package designed to visualize gene models from GTF files and variants from VCF files.
pneuro-onc-browsers
Pediatric Neuro-oncology Cell Atlas
2a-peptide-search
HMM models of the 2A peptide and DB search results
ameloblast-scrnaseq
scRNA-seq analysis of ameloblasts
cellranger
10x Genomics Single Cell Analysis
lnsc-cell-browser
LNSC cell browser
molb-7950-data
Data repository for MOLB 7950
morrison-lnsc
Integrated analysis of CHIKV LNSC datasets
rbitemplate
RBI pkgdown template
remora
Methylation/modified base calling separated from basecalling.
tRNAseq-logistics
Nanopore tRNA sequencing logistics (Old chemistry)