Ruben Lopez's repositories
cpvt-serca_paper
Source code for reproducing the analysis of the SERCA and CPVT paper.
napari-omaas
A napari plugin to acquire and analyze optical mapping data
ADS_CAS_Bern_2020
Material from the CAS on Advance Data Science
agency-jekyll-theme
Jekyll version of the newest Agency Bootstrap theme, plus new features: Google Analytics, Markdown support, custom pages, and more!
AML_FinalProject
Final Project for the CAS ind Advanced Machine Learning
AnlysisOfWaves
Repository containing methods applied for the analysis of the data in the SERCA publication
CAS_AML_M1-2_Project
Project for the AML CAS Module 1 & 2
cell_quantitation_app
This shiny app help to visualize quickly the survival ratio of freshly isolated cells (cardiomyocytes) and generates a report.
gitignore
A collection of useful .gitignore templates
napari-macrokit
Executable script generation for napari plugins
napari-mat-file-reader
Wrapper to read specific .mat files in Napari
napari-matplotlib
Linking napari layers with Matplotlib plots
napari-micromanager
GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
napari-segment-anything
Segment Anything Model (SAM) native Qt UI
napari-sif-reader
This is a simple wraper to read .sif format files from Andor Cameras Technology
napari-time_series_plotter
A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.
optimap
An open-source python library for the processing of fluorescence video data
package_rl
demo python package
rjlopez2.github.io
Builds for my personal website
rjlopez2.github.io_old
Builds for my personal website
sif_parser
A small package to read Andor Technology Multi-Channel files.
SR_experiments_protocol
Shiny app to compute salutions for the SR (Calsium signaling) experiments