richelbilderbeek

shellcheck

ShellCheck, a static analysis tool for shell scripts

DeepSpeech

DeepSpeech is an open source embedded (offline, on-device) speech-to-text engine which can run in real time on devices ranging from a Raspberry Pi 4 to high power GPU servers.

mit-deep-learning-book-pdf

MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville

patterns

A catalogue of Rust design patterns, anti-patterns and idioms

conda

A system-level, binary package and environment manager running on all major operating systems and platforms.

ModernCppStarter

🚀 Kick-start your C++! A template for modern C++ projects using CMake, CI, code coverage, clang-format, reproducible dependency management and much more.

ggdist

Visualizations of distributions and uncertainty

PPanGGOLiN

Build a partitioned pangenome graph from microbial genomes

bigstatsr

R package for statistical tools with big matrices stored on disk.

adegenet

adegenet: a R package for the multivariate analysis of genetic markers

riskmetric

Metrics to evaluate the risk of R packages

GenNet

Framework for Interpretable Neural Networks

OpenMx

Repository for the OpenMx Structural Equation Modeling package

hdf5r

ROCR

An R package for visualizing classifier performance (Sing/Sander/Beerenwinkel/Lengauer [2005] Bioinformatics)

Spectra

Low level infrastructure to handle MS spectra

GenoCAE

Convolutional autoencoder for genotype data

treestats

DAISIEprep

Extracts phylogenetic island community data from phylogenetic trees

TreeSearch

R package for phylogenetic tree search under custom optimality criteria

Muff2021Reply

dewlap

Comparing dewlap coloration across islands in Caribbean lizards

comsie

Individual-based simulation of diversification with Lotka-Volterra competition on an island

dynamic-beast

Dynamic BEAST2 XML files

gwas3

R package for doing three-stage GWAS

DAISIEcontinental

An R package to test the continental DAISIE MLE model

DAISIEmainland

Simulate phylogenetic data on islands with a evolving mainland pool

TijdSprint

Regatta management and timekeeping software for rowing

brachypoder

An R package to read the data from the brachypode simulations

WOLTER

Wibi Okkel's Laser Turret Entertainment Robot