richardxie1119's repositories
multiscale_analysis
reproducing data analysis for MEISTER
biobeam
GPU accelerated beam propagation tools for biological light tissue simulations
cdvae
An SE(3)-invariant autoencoder for generating the periodic structure of materials [ICLR 2022]
chemical_vae
Code for 10.1021/acscentsci.7b00572, now running on Keras 2.0 and Tensorflow
chemprop
Message Passing Neural Networks for Molecule Property Prediction
czifile
czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html
DeepEI
Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks
DeepPATH
Classification of Lung cancer slide images using deep-learning
graph_classification
Learning from graph data using Keras
GraphSAGE
Representation learning on large graphs using stochastic graph convolutions.
icsg3d
Official implementation of "3-D Inorganic Crystal Structure Generation and Property Prediction via Representation Learning" (JCIM 2020)
image-super-resolution
🔎 Super-scale your images and run experiments with Residual Dense and Adversarial Networks.
imaging-mass-spectrometry
Research and Overview
Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
microMS
GUI for performing automatic cell finding and point based registration
MOFA
Multi-Omics Factor Analysis
open-solution-data-science-bowl-2018
Open solution to the Data Science Bowl 2018
pyimzML
A parser to read .imzML files with python
shap
A unified approach to explain the output of any machine learning model.
stellargraph
StellarGraph - Machine Learning on Graphs
tensor_completion
Low-rank tensor completion algorithm - HaLRTC.
umap
Uniform Manifold Approximation and Projection
unet4nuclei
U-net based segmentation of nuclei in microscopy images