richardmleggett

Richard Leggett's repositories

nextclip

Nextera Long Mate Pair analysis and processing tool

Language:CGPL-3.01900

MARTi

Metagenomic Analysis in Real Time

Language:JavaMIT17 5 1

acc2tax

Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings

Language:C1200

NanoOK

Analysis tool for Nanopore sequencing data

Language:JavaMIT10 2 9

bubbleparse

Classify and rank SNPs identified by cortex_con

Language:C5 30

metacortex

Language:CGPL-3.04 40

adaptive_sampling

Adaptive sampling for metagenomics

3 3 1

al2tex

Language:Java100

amranalyser

Bespoke AMR analysis for BAMBI paper

Language:Java1 20

bambi

Scripts and files for the Nanopore BAMBI publication

Language:Perl100

kontaminant

Language:CGPL-3.0100

makesnps

Make a copy of a reference genome with added SNPs

Language:C100

scripts

Language:Perl100

bacpro

BAC processing scripts

GPL-3.0000

beebem-mac

This is the Mac port of BeebEm

Language:C++000

brickopore

Language:C000

BrickoporeGUI

GUI for Blocksford Brickopore

Language:Java000

canu

A single molecule sequence assembler for genomes large and small.

Language:C++000

metagenomics19

Teaching material for EI Metagenomics 2019 course

000

MMParse

MetaMaps parsing

Language:JavaMIT000

nanook_example

Example data for NanoOK

000

NanoOKReporter

Language:Java020

pflu

000

pflupb

020

radplex

RADSeq demultiplexing tool

Language:CGPL-3.0000

RevMet

Reverse Metagenomics (RevMet) tutorial

GPL-3.0000