Richard Gerum (rgerum)

rgerum

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Company:York University

Home Page:https://www.richardgerum.com

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fabrylab

Richard Gerum's repositories

pylustrator

Visualisations of data are at the core of every publication of scientific research results. They have to be as clear as possible to facilitate the communication of research. As data can have different formats and shapes, the visualisations often have to be adapted to reflect the data as well as possible. We developed Pylustrator, an interface to directly edit python generated matplotlib graphs to finalize them for publication. Therefore, subplots can be resized and dragged around by the mouse, text and annotations can be added. The changes can be saved to the initial plot file as python code.

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unofficial-duolingo-stories

This project brings the official Duolingo Stories to new languages, translated by a community effort.

cameratransform

cameratransform is a python package which can be used to fit camera transformations and apply them to project points from the camera space to the world space and back.

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saenopy

Semi-affine Elastic Network Optimizer to calculate forces in collagen or other biopolymer networks.

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bayesloop

Probabilistic programming framework that facilitates objective model selection for time-varying parameter models.

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CompactionAnalyzer

Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.

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css-for-js-new-grid-times

Module 7 Workshop

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jointforces

A Python package to conduct 3D Traction Force Microscopy on multicellular aggregates (spheroids).

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