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Kimberly Reynolds (reynoldsk)

reynoldsk

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Company:University of Texas Southwestern Medical Center

Location:Dallas, TX

Home Page:https://reynolds-lab.net/

Twitter:@kimreynolds_lab

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Kimberly Reynolds's repositories

pySCA

A python implementation of the Statistical Coupling Analysis (SCA)

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:26Issues:9Issues:6

allostery-in-dhfr

Code that performs analysis of deep mutational scanning data for an allosteric DHFR-LOV2 fusion.

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:1Issues:0Issues:0

CryptochromeSCA

SCA for the Cryptochrome (CRY)/Photolyase family.

Language:HTMLLicense:BSD-3-ClauseStargazers:1Issues:0Issues:0

titratableCRISPRi

code (iPython notebooks) used in analyzing titratable CRISPRi experiments

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:1Issues:2Issues:0

ContinuousEpistasis

Data analysis and code for Otto et al, "A continuous epistasis model for predicting growth rate given combinatorial variation in gene expression and environment"

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:0Issues:0

dhfr-tyms-epistasis

Analysis of DHFR deep mutational scanning data collected in varied TYMS genetic backgrounds

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:0Issues:0

KinaseAllosterySCA

SCA for the Eukaryotic Protein Kinases

Language:HTMLLicense:BSD-3-ClauseStargazers:0Issues:0Issues:0