reubwn

Reuben W Nowell's repositories

scripts to parse and analyse MCScanX collinearity output

Language:PerlMIT29 2 5

scripts for the analysis of HGT in genome sequence data

Language:PerlMIT7 2 6

A collection of scripts for QC / summarising OrthoMCL output

Language:Perl3 20

Useful scripts for various things

Language:PerlMIT3 30

scripts to look at TE synteny changes across multiple genomes

Language:RMIT2 20

Perl wrapper scripts for running the BayesTraits program with gene presence/absence data across multiple genomes

Language:PerlMIT1 20

scripts for extracting alignments from MCScanX results and testing for microhomology

Language:PerlMIT1 2 1

scripts and pipelines for the bdelloid genomes project

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scripts for analysis of DE experiment

Language:RMIT020

simulating nucleotide evolution with mutation, drift, gene conversion and horizontal transfer

Language:RMIT020

Resources for the Caenorhabditis genome project

Language:PerlGPL-3.0020

scripts for bid sorting

Language:Perl020

collection of PBS qsub scripts

Language:ShellMIT000

detection of recombination (Hudson's 4-gamete) from phased VCF

Language:PerlMIT020

Language:JavaScriptMIT000