rescuz / GPCs

GPCs can be used to perform correlation analysis between genotype and phenotype data

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

GPCs

GPCs can be used to perform correlation analysis between genotype and phenotype data According to inupt vcf file list, variant information, qc thresold and phenotype file to output annotation file about population frequency, group information in gene level and mutation level, and boxplots with two-side t.test. Cautions:

  1. The phenotype inputed into our program must be quantitative phenotype

About

GPCs can be used to perform correlation analysis between genotype and phenotype data


Languages

Language:Perl 82.7%Language:Shell 17.3%