reimandlab's repositories
ActivePathways
Integrative pathway enrichment analysis of multivariate omics data
ActiveDriverDB
ActiveDriverDB
ActiveDriverWGSR
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
DPM_publication_code
DPM: code and input files for the publication
lncRNAs_TCGA
Code I have used throughout my Masters analyzing TCGA clinical and RNA-Seq datasets to discover lncRNA prognostic markers
needleplot
Another needleplot for mutation data, used by ActiveDriverDB
CNNClassifier
Convolutional Neural Net for Sequence Classification
shiny-web-form
A web form created as a shiny app for literature analysis
muts-needle-plot
A needle plot for mutation data
PPI_network_based_gene_type_prediction_model
This is the repository for Reagan (Gen) LI's BCB430 summer project.
Language:R000
ShinyActivePathways
A shiny web server that performs ActivePathways and display results in Enrichment map
Language:R000