This repository contains all data, code, figures, and statistics for:
Targeted manipulation of abundant and rare taxa in the Daphnia magna microbiota with antibiotics impacts host fitness differentially. Reilly O. Cooper, Janna M. Vavra, Clayton E. Cressler.
A preprint can be found on bioRxiv, and raw 16S sequencing data can be found in BioProject PRJNA543842. A .rds file of the dada2-processed sequencing data can be found in the data folder.