YuYangyang's repositories
PacBioWorkflow
A collection of scripts for our PacBio paper
DailyCode
Collections of daily code
books
"我的阅历"
transformers
🤗Transformers: State-of-the-art Natural Language Processing for Pytorch and TensorFlow 2.0.
Cell_Communication_igraph
Cell_Communication_igraph
CellRanger
CellRanger associate files
Color-Samples-by-Species
Color Samples by Species
Lihang
Statistical learning methods, 统计学习方法(第2版)[李航] [笔记, 代码, notebook, 参考文献, Errata, lihang]
demuxlet
Genetic multiplexing of barcoded single cell RNA-seq
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
scvelo
RNA Velocity generalized through dynamical modeling
plotnine
A grammar of graphics for Python
plotnine-examples
Jupyter Notebooks that are part of the plotnine documentation
Using-plotnine-to-plot
Using plotnine to plot
dna-seqfish-plus
dna seqfish image analysis code
anndata
Annotated data.
missCompare
missCompare R package - intuitive missing data imputation framework
coursera-Applied-Data-Science-with-Python
Repository for coursera specialization Applied Data Science with Python by University of Michigan
scgen
Single cell perturbation prediction
pheatmap_1
An example of pheatmap
PCA_Analysis
PCA Analysis
ThinkPython2
LaTeX source and supporting code for Think Python, 2nd edition, by Allen Downey.
HumanPilot
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
imputationBenchmark
benchmark for single-cell RNA-seq imputation methods
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
python3-cookbook
《Python Cookbook》 3rd Edition Translation
Python
最良心的 Python 教程：