Robert Castelo (rcastelo)

rcastelo

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Company:Universitat Pompeu Fabra

Location:Barcelona

Home Page:https://functionalgenomics.upf.edu

Twitter:@robertclab

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Robert Castelo's repositories

GSVA

Gene set variation analysis

GenomicScores

Provide support to store and retrieve genomic scores associated to nucleotide positions along a genome

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atena

Analysis of transposable elements

VariantFiltering

Filter genetic variants using different criteria such as inheritance model, conservation, etc.

qpgraph

Estimate gene and eQTL networks from high-throughput expression and genotyping assays

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awesome-bioinformatics-benchmarks

A curated list of bioinformatics bench-marking papers and resources.

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bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor

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bioc_coc_multilingual

Multilingual version of the Bioconductor Code of Conduct

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BiocManager

CRAN Package For Managing Bioconductor Packages

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BiocPkgTools

Computable build reports, package metadata, and download stats from the Bioconductor project

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BiocStickers

Stickers for some Bioconductor packages - feel free to contribute and/or modify.

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Category

Category Analysis

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gDNAx

Diagnostics for assessing genomic DNA contamination in RNA-seq data

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GenomicAlignments

Representation and manipulation of short genomic alignments

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graph

graph: A package to handle graph data structures

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rhdf5

Package providing an interface between HDF5 and R

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ScaledMatrix

Clone of the Bioconductor repository for the ScaledMatrix package.

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