Ryan Cali's repositories
ENIGMA_DWI_Training
Repository containing files associated with ENIGMA diffusion weighted image preprocessing protocol and instructional video series. Designed by Ryan Cali for the 2022 ReproNim Fellowship Project and the Imaging Genetics Center at the University of Southern California. Questions? Reach out to the author: rcali@loni.usc.edu
FreeSurfer-Between-Groups-Volumetric-Correlations
Statistical pipeline for correlating volumetric data from FS segmentation between two groups using recon-all stats file.
TMS_To_MRI_Mapping
Tool for mapping from Nexstim TMS system to MRI space using a T1w image.
fmriprep_QC_MGH
Quality control script for NICC Lab at MGH.
gautamkrishnar
Yet another GitHub profile readme :smiley:
HCPpipelines_edited
Custom build of HCP pipeline
OptiBET_FW_Gear
A repository that contains all files required to upload optiBET as a Flywheel Gear. optiBET is used for optimal brain extraction of structural MRI images in pathological brains.
Parse_CSVs
Simple python script to parse CSV/TSV files generated by fMRIprep.
pydra
Pydra Dataflow Engine
ryan
Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.
twitter_MRI_bot
A bot for querying Pubmed for the most recent publications in MRI research.
txtai
đź’ˇ Semantic search and workflows powered by language models
Vituity_project
Repository for technical project for Vituity.