Rachel Ng's repositories
scatterpie
Scatter plot with pie chart markers using matplotlib in Python.
cookiecutter-snakemake-workflow
A cookiecutter template for Snakemake workflows
Font-Awesome
The iconic SVG, font, and CSS toolkit
hugo-book
Hugo documentation theme as simple as plain book
sbvar
Varying Parameter Analysis for Systems Biology
single-cell-cellphonedb
Snakemake workflow for running cellphonedb.
snakemake-merge-wgs
Snakemake pipeline for filtering, lifting over to hg38, and merging WGS gvcf files.
hugo-toha.github.io
An example hugo static site with Toha theme.
minisom
:red_circle: MiniSom is a minimalistic implementation of the Self Organizing Maps
pySankey
create sankey diagrams with matplotlib
single-cell-rna-seq
A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
slurm
Cookiecutter for snakemake slurm profile