rachel-kt's repositories
CSBD-summer-school
Summer school in Systems Biology (10th-17th August, 2019) organized jointly by the International Max Planck Research School for Cell, Developmental and Systems Biology and the Center for Systems Biology Dresden (CSBD).
big-fish
Toolbox for the analysis of smFISH images.
big-fish-examples
Notebooks to illustrate how BigFISH is working.
Breast-Cancer
In this study, we investigated potential prognostic and predictive value of protein tyrosine phosphatases in breast cancer chemoresistance and disease recurrence.
FlaskApp
A simple web app to track carbon emission
fq-imjoy
ImJoy plugins to run different smFISH analysis in a user-friendly setting.
Transcriptome-analysis-Arabidopsis
Transcriptomic analysis of K+ deprived WT (col-0) and cipk9 mutant in Arabidopsis thaliana to advance our understanding of the architecture and dynamic regulation of the K+ responsive gene regulatory network.
MArray
R scripts for microarray analysis
REvolution
hackseq 2019 project
RNAT
Identification of RNA thermometers in Mycobacterium tuberculosis
web_scrape_kmplotter
Automatically fetches the hazard ratio and the Kaplan-Meier plot for a list of genes