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r3fang / SnapATAC

Analysis Pipeline for Single Cell ATAC-seq

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Loading species mixed data

jindalk opened this issue · comments

commented

Hi, I am wondering if there is a way to load species mixed data to snaptools. I have a single bam file for reads from both hg19 and mm10. Ideally, I'd like to load this into snapATAC and then analyze only one of the species.