Beast code in Giters

Rongxin Fang's repositories

Analysis Pipeline for Single Cell ATAC-seq

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A module for working with snap files in Python

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<<------ Use SnapATAC!!

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Implementation of sequence alignment (C).

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CREST-seq peak calling.

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MERFISH Decoding Pipeline

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Targeted Fusion Caller (C)

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prediction of marker genes for cell typing and spatial gradients from scRNA-seq

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a generalist algorithm for cellular segmentation

Language:Jupyter NotebookBSD-3-Clause000

A user-space file system for interacting with Google Cloud Storage

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A python3 pipeline for MERFISH probe design.

Language:Jupyter NotebookMIT000

MERIFSH decoder

MIT010

Example MERlin analysis parameters for processing MERFISH data

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Subpixel cross-correlation image alignment of astronomical images

Language:PythonBSD-3-Clause000