r3fang / SnapATAC

Analysis Pipeline for Single Cell ATAC-seq

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makeBinary error: vector memory exhausted

spietrzak opened this issue · comments

I am trying to run the makeBinary command on a snap object in SnapATAC using RStudio. When I try to run it, however, I see the following error:

Error: vector memory exhausted (limit reached?)

I removed all the other objects from my workspace and it does seem to run a bit longer, but the error message still pops up. Does anyone know how I can resolve this issue? It doesn't seem to be associated with SnapATAC itself, so I'm not sure if anyone here will have any ideas, but any help would be much appreciated.

Thank you.