Young-mok Jung's repositories
aiortc-1
WebRTC and ORTC implementation for Python using asyncio
bwa-gpu
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
bwa-mem2
The next version of bwa-mem (WIP; not recommended for production uses at the moment)
Clair
Clair: Exploring the limit of using deep neural network on pileup data for germline variant calling
Clair3
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Clairvoyante
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing
cs
A simple, yet powerful CloudStack API client for python and the command-line.
cue
Deep learning framework for SV calling and genotyping
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
docker-backuppc
Docker container with BackupPC version 4.x/3.x based on Alpine distribution.
docker-elk
The ELK stack powered by Docker and Compose.
elastalert
ElastAlert that exposes REST API's for manipulating rules and alerts
gpt-2-Pytorch-for-INAseminar
Simple Text-Generator with OpenAI gpt-2 Pytorch Implementation
htslib
C library for high-throughput sequencing data formats
methylprep
Python-based preprocessing software for Illumina methylation arrays
ns3-rdma
NS3 simulator for RDMA over Converged Ethernet v2 (RoCEv2), including the implementation of DCQCN, TIMELY, PFC, ECN and shared buffer switch
onconpc
Clinical sequencing-based primary site classifier
PHPMailer
The classic email sending library for PHP
pytorch-pyramid-pooling
This Module implements Spatial Pyramid Pooling (SPP) and Temporal Pyramid Pooling (TPP) as described in different papers.
quito418
Website
quito418_depre
Website
RMI
The recursive model index, a learned index structure
saleor
A modular, high performance, headless e-commerce storefront built with Python, GraphQL, Django, and ReactJS.
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
sapling
SAPLING: Suffix Array Piecewise Linear INdex for Genomics
stelace
Open-source marketplace backend in Node.js, empowering Web platforms with Search API, Automation, Auth, Headless CMS… ⚡ :computer:
webrtc-streamer
WebRTC streamer for V4L2 capture devices and RTSP sources