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quinngroup
/
ornet-reu-2018
OrNet work part of summer 2018 REU.
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quinngroup/ornet-reu-2018 Issues
Run PCA on affinity matrix videos
Updated
6 years ago
Compute affinity matrix "videos" for each cell
Updated
6 years ago
Comments count
1
Calculate average change in pairwise means of GMM components
Updated
6 years ago
Run existing GMM pipeline on cell data
Updated
6 years ago
Comments count
3
Run SpatialDE code on cell videos
Updated
6 years ago
Read paper
Updated
6 years ago
Write a few more unit tests
Closed
6 years ago
Finalize "UGMM" implementation
Updated
6 years ago
Contact SpatialDE maintainers for clarification on internal ordering of indices
Updated
6 years ago
Comments count
1
Look into DataFrame columns for SpatialDE output
Closed
6 years ago
Comments count
1
Write unit tests for raster_scan.py
Closed
6 years ago
Comments count
1