Nicholas Mancuso's repositories
CLAPmagrittrCLAP
Improve the readability of R code with the pipe
PAINTOR_V3.0
Fast, integrative fine mapping with functional data
fusion_twas
methods for functional summary-based imputation
geno-sugar
Utilities for handling genetic data for GWAS
jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
limix-feedstock
A conda-smithy repository for limix.
LinearThunderdome
Thunderdome of linear models in ill-conditioned settings
lineax
Linear solvers in JAX and Equinox. https://docs.kidger.site/lineax
numpyro
Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.
optimistix
Nonlinear optimisation (root-finding, least squares, ...) in JAX+Equinox. https://docs.kidger.site/optimistix/
prior_var_empbayes
Testing empirical bayes for inference of prior variance terms in finemapping
pyfizi-feedstock
A conda-smithy repository for pyfizi.
Randomly-Pivoted-Cholesky
Code for the paper "Randomly pivoted Cholesky: Practical approximation of a kernel matrix with few entry evaluations"
REMLSketch
Sketching version of REML inference
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks