qins / infercnvApp

This is an R shiny app created as a user friendly way to run the R package infercnv. Infercnv is used to explore tumor single cell RNA-Seq data to identify evidence for somatic large-scale chromosomal copy number alterations, such as gains or deletions of entire chromosomes or large segments of chromosomes. More information on infercnv can be found on the infercnv Github Page

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infercnvApp

Visit project wiki for InfercnvApp documentation.

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This is an R shiny app created as a user friendly way to run the R package infercnv. Infercnv is used to explore tumor single cell RNA-Seq data to identify evidence for somatic large-scale chromosomal copy number alterations, such as gains or deletions of entire chromosomes or large segments of chromosomes. More information on infercnv can be found on the infercnv Github Page

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