Qiang Li's repositories
brain-hacking-101
Brain Hacking 101 Course for the 2015 HBM Hackathon in Honolulu Hawaii
autovpn
Easily connect to a VPN in a country of your choice.
BasicV1
A simple model of V1 receptive field learning in 25 lines of Python
CorEx
CorEx or "Correlation Explanation" discovers a hierarchy of informative latent factors. This reference implementation has been superseded by other versions below.
dash
Interactive, reactive web apps in pure python :star:
Decoding
Apply machine learning methods analysis fMRI datas , decoding mental changes coresponding to different congitive tasks stimuli
fMRI-classification-example
Pattern classification with fMRI data. Reproduced from Poldrack's repository by Matlab.
nifti2dicom
Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series
nilearn
Machine learning for NeuroImaging in Python
Nipype
This code is a shortened and simplified version of the real Nipype code
openfmri
code related to the OpenFMRI project
pattern_classification
A collection of tutorials and examples for solving and understanding machine learning and pattern classification tasks
poldracklab-learning
Tutorials for learning imaging analysis (and other things), typically in ipython Notebook or R Markdown
PyROI
Functional neuroimaging region of interest extraction and analysis in Python.
PySurfer_plottingscripts
misc scripts and examples for using PySurfer
python-matlab-bridge
A simple Python => MATLAB(R) interface and a matlab_magic for ipython
python-neuroimaging-lesson
Lessons on neuroimaging analysis with Python
SamuROI
SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.
Setting-up-Amazon-EC2-for-Deep-Learning
Instructions to install cuda, theano, nolearn, sklearn, skimage, lasagne, cudamat for Deep Learning
TensorFlow-with-Haxby-Dataset
Getting the Convnet of Tensorflow with Haxby dataset, the infamous neuroimaging dataset
TimeSeriesAnalysiswithPython
Time Series Analysis with Python
TtoZ
Convert T score brain statistical map to Z score map
whyhowlocalizer
Materials and MATLAB Psychtoolbox code for running the Why/How Localizer Task