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pwl / hisat2-preprocessing

A pre-processing (alignment) pipeline based on hisat2

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hisat2alignmentpipelinedockersnakemake

HISAT2 alignment pipeline

Flow diagram

Usage

See docker-compose.yml for details.

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A pre-processing (alignment) pipeline based on hisat2

hisat2alignmentpipelinedockersnakemake

License:MIT License

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Language:Python 68.1%Language:Perl 23.6%Language:Dockerfile 8.3%