Paul Wighton's repositories
med-dev-refs
A collection of Regulatory, Guidance and Standards documents relevant for the development of Software-Only Medical Devices
bart-docker
A docker container for the BART Toolbox for Computational MRI and jupyter with related python packages
batchtools
Command line tool to process subjects with re:THINQ using AWS Batch
BIDS-converter
helps you convert your PET data! raw PET scanner files (e.g. ecat, dicom) and additional side file like .e.g excel sheets
bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
bids-tools
A collection of tools for creating BIDS datasets in one container
bloodstream
A PET BIDS blood-processing tool
brainhack-boston.github.io
Brainhack Boston
freesurfer
The official Freesurfer repository maintained by LCN
freesurfer-bids-app
recon-all from FreeSurfer
fs2NiiVueColormaps
Convert FreeSurfer Colormaps to NiiVue format
global2021
Website for Brainhack global 2021
interpolate_blood
PET blood processing
MoCoProject
Code for the work on the MoCo project
mrhub
Hub for open-source MR-related software
murfi2
The realtime fMRI software platform - an MIT-MGH collaboration
neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
nipype
Workflows and interfaces for neuroimaging packages
openneuropet.github.io
OpenNeuroPET project include link with OpenNEuroPET repopsitory, GDRP compliance, BIDS converters, templates, etc
pet-pipelines
A suite of brain PET processing pipelines
petpipeline
Repository to showcase a pipeline for pre-processing PET data using nipype workflows
qm-sops
Template Quality Manual and SOPs for the development of Software Medical Devices
runner-test
Test repo for github runners
socket2dash
Accepts data from a socket, displays it on a real-time dashboard.