pstjohn

BioNeMo

For managing BioNeMo Service Example notebooks

NeMo

A scalable generative AI framework built for researchers and developers working on Large Language Models, Multimodal, and Speech AI (Automatic Speech Recognition and Text-to-Speech)

supernote-tool

Unofficial python tool for Supernote

rdkit-sys

Rust crate for linking against the RDKit C++ API

webdataset

A high-performance Python-based I/O system for large (and small) deep learning problems, with strong support for PyTorch.

polars

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

pytorch-image-models

The largest collection of PyTorch image encoders / backbones. Including train, eval, inference, export scripts, and pretrained weights -- ResNet, ResNeXT, EfficientNet, NFNet, Vision Transformer (ViT), MobileNetV4, MobileNet-V3 & V2, RegNet, DPN, CSPNet, Swin Transformer, MaxViT, CoAtNet, ConvNeXt, and more

sematic

An open-source ML pipeline development platform

mlb_showdown_card_bot

Showdown Bot is the simplest way of creating custom MLB Showdown cards. Simply enter a player's name, season, and image. The Showdown Bot takes care of the rest. Check it out https://showdownbot.com

equinox

Elegant easy-to-use neural networks + scientific computing in JAX. https://docs.kidger.site/equinox/

pytorch_geometric

Graph Neural Network Library for PyTorch

torchdyn

A PyTorch library entirely dedicated to neural differential equations, implicit models and related numerical methods

gvp-pytorch

Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure

gvp

Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure

upper-bound-energy-gnn

GNN for predicting an upper bound of the relaxed energy for a given unrelaxed structure

tf_geometric

Efficient and Friendly Graph Neural Network Library for TensorFlow 1.x and 2.x

simple-resume-vue

Simple universal resume based on Vue

graph-env

Reinforcement learning for combinatorial optimization over directed graphs

rlmolecule

A reinforcement learning library for material and molecule optimization

aesara

Aesara is a Python library for defining, optimizing, and efficiently evaluating mathematical expressions involving multi-dimensional arrays.

spektral

Graph Neural Networks with Keras and Tensorflow 2.

gnn

TensorFlow GNN is a library to build Graph Neural Networks on the TensorFlow platform.

api-umbrella

Open source API management platform

GraphDot

GPU-accelerated Marginalized Graph Kernel with customizable node and edge features; Gaussian process regression.

cli

🥧 HTTPie CLI — modern, user-friendly command-line HTTP client for the API era. JSON support, colors, sessions, downloads, plugins & more.

cobrakbase

KBase Interface for COBRApy

eagerpy

PyTorch, TensorFlow, JAX and NumPy — all of them natively using the same code

CNApy

An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!

optlang_enumerator

DECIMER-Image-Segmentation

Chemical structure detection and segmentation tool for Journal articles.