propenster / wdlexecutor

WDL Executor built with love using [Rust](https://rustlang.org) runs Cromwell institute's WDL pipelines. WDL pipelines are based on the Workflow Definition Language pipeline for bioinformatics and genomic exploration.

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WDL Executor

WDL Executor built with love using Rust runs Cromwell institute's WDL pipelines. WDL pipelines are based on the Workflow Definition Language pipeline for bioinformatics and genomic exploration.

  • This is an attempt at making the fastest WDL pipeline runner yet without help from anyone not even The Broad Institute - the creator of cromwell and gatk, and lest I forget, in the smallest number of LOCs possible.

  • Rust == 10000 * JAVA [:lol] Ratio this statement.

Features

  • WDL parser (This is very important)
  • WDL runner/executor that just takes a WDL file and executes whatever is inside
  • WDL ratioer (WDL jokes and funny stuff)

About

WDL Executor built with love using [Rust](https://rustlang.org) runs Cromwell institute's WDL pipelines. WDL pipelines are based on the Workflow Definition Language pipeline for bioinformatics and genomic exploration.


Languages

Language:WDL 99.8%Language:Rust 0.2%