promexjm's repositories
diag_pipelines
Pipelines dealing with high throughput sequencing data for microbiology diagnostic procedures. Documentation available at http://metagenlabdiag-pipelines.readthedocs.io/en/latest/ and Docker images at https://hub.docker.com/r/metagenlab/diag_pipelines/.
dingtalk-sdk
钉钉 dingding Python SDK。 DingTalk SDK for Python http://dingtalk-sdk.readthedocs.io/zh_CN/latest/
django-admin-sortable2
Generic drag-and-drop ordering for objects in the Django admin interface
django-list-wrestler
Make django admin lists easier to sort and collapse.
fastv
An ultra-fast tool to detect and visualize microbial sequences from sequencing data, and can be used to detect viral infectious diseases, like COVID-19.
kaiju
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
pathongs
Pathogen NGS Documentary
pavian
🌈 Interactive analysis of metagenomics data
pyce
Encrypted Python Execution
pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
python-docx-template
Use a docx as a jinja2 template
simpleui
A modern theme based on vue+element-ui for django admin.一款基于vue+element-ui的django admin现代化主题。喜欢可以点个star✨
VirSorter2
customizable pipeline to identify viral sequences from (meta)genomic data
wechatpy
WeChat SDK for Python