prihoda

AbNumber

Convenience Python APIs for antibody numbering using ANARCI

golem

Open-source chatbot framework for python developers. Batteries included 🔋🔋

usum

USUM: Plotting sequence similarity using USEARCH & UMAP & t-SNE

bgc-pipeline

ANARCI-pyhmmer-fork

Antibody Numbering and Antigen Receptor ClassIfication

antismash

antiSMASH

bgc-pipeline-1

conda

Specifying a conda environment with `environment.yml`

dvc

Data Science Version Control - Git for data scientists

fairseq

Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

hmmlearn

Hidden Markov Models in Python, with scikit-learn like API

ImmuneBuilder-fork

Predict the structure of immune receptor proteins

jupyterlab

Demonstrating how to get JupyterLab working with Binder

Machine-learning-for-proteins

Listing of papers about machine learning for proteins.

marshmallow_dataclass

Automatic generation of marshmallow schemas from dataclasses.

MaskedProteinEnT-fork

miniwdl

A static analysis toolkit for the Workflow Description Language

MLPrague2019

mongoengine-migrate

Migrations for MongoEngine inspired by Django

mRNAid-fork

Mutation_Maker

Application for mutagenic primer design. Facilitates development of biocatalysts (Green Chemistry) and new therapeutic proteins.

nightingale

Data visualisation web components for the life sciences.

osprey-binder

pyfaidx

Efficient pythonic random access to fasta subsequences

readthedocs.org

The source code that powers readthedocs.org

RREFinder

Bioinfromatic application for the detection of RREs in protein sequences of interest

shields

Concise, consistent, and legible badges in SVG and raster format

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

transformers

🤗Transformers: State-of-the-art Natural Language Processing for Pytorch, TensorFlow, and JAX.

umap-test