prasundutta87's starred repositories
pyflow-RNAseq
RNAseq pipeline based on snakemake
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
bioinformatics
:microscope: Path to a free self-taught education in Bioinformatics!
helpful_commands
Command-line tools, commands, and code snippets for performing routine data processing and bioinformatics tasks.
training-collection
Collection of bioinformatics training materials
training-collection
Collection of bioinformatics training materials
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
kingfisher-download
Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.
giab_data_indexes
This repository contains data indexes from NIST's Genome in a Bottle project.
Bash-Oneliner
A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.