ppraykov's repositories
notebooks
A collection of iPython/Jupyter notebooks.
mind_2017
Materials for Methods in Neuroscience at Dartmouth (MIND) 2017 Summer School on Network Dynamics
bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
statannot
add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot
word_vectors_game_of_thrones-LIVE
This is the code for the "How to Make Word Vectors from Game of Thrones (LIVE) " Siraj Raval on Youtube
Coursera-Computational-NeuroScience
Coursera Computational-NeuroScience course of the University of Washington
hackathon2019
Website and projects for the OHBM Hackathon in Rome 2019
mfit
Simple model-fitting tools
paper-orbitfmri
Collection of scripts and data files for an fMRI functional connectivity study of item and spatial context memory precision
neurosynth-mfc
Code, data, and results for De La Vega, Chang, Banich, Wager & Yarkoni. Journal of Neuroscience (2016).
Probabilistic-and-Bayesian-PCA
Principal Component Analysis from a statistical perspective
sentence2vec
Sentence2vec as described in A SIMPLE BUT TOUGH TO BEAT BASELINE FOR SENTENCE EMBEDDINGS by Sanjeev Arora, Yingyu Liang, Tengyu Ma
Learn_Machine_Learning_in_3_Months
This is the code for "Learn Machine Learning in 3 Months" by Siraj Raval on Youtube
Intro-Comp-Neuro
Codes to accompany the book An Introductory Course in Computational Neuroscience
DBDA-python
Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code
GLMM-in-Python
Generalized linear mixed-effect model in Python
Analyzing_Neural_Time_Series
python implementations of Analyzing Neural Time Series Textbook
Doing_bayesian_data_analysis
Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke
NPBayes_fMRI
Bayesian Non-Parametric Spatio-Temporal Models for fMRI data
frontiers2013
Paper for special issue "Python in Neurosciences II"
dimRed
python, scala, and pyspark code for few dimensional reduction algorithms
STANCE
The MATLAB-based functional magnetic resonance image (fMRI) simulator STANCE, the Spontaneous & Task-related Activation of Neuronally Correlated Events simulator is a SPM8 add-on toolbox with command-line functions useful.
brain-plots
Quickly and easily create 2d and 3d plots of fMRI data (using MATLAB).
tlsa_matlab
Matlab code for Topographic Latent Source Analysis of brain imaging data
Computational-NeuroScience
Computational NeuroScience is a rigorous 8-week course in Coursera from University of Washington that focus on basic computational techniques for analyzing, modelling and understanding the behaviour of cells and circuits in the brain.
pyhpc-tutorial
Python for HPC Tutorial Notebooks
moving_pictures
Create a movie from a sequence of images in Python (uses PIL and ffmpeg)