powellb / fjordeco

Files for Friday Harbor Labs Summer Course on FjordEco

FjordEco Ecosystem Modeling Course

This section of the summer course will focus on numerical modeling of ecosystems in the Antarctic Fjord. We will learn the basic techniques...

1. Download and install miniconda for your respective platform from:

https://conda.io/miniconda.html

2. Once installed, copy the environment.yml file to your local machine.

3. Create a new conda environment with:

% conda env create --file environment.yml

This will create a new conda environment with python and R installed and ready to use the notebooks provided in the lab session.

4. Once it is installed, select your new conda environment via:

% conda activate fjordeco

5. Then, start the Jupyter Lab:

% jupyter lab

6. This should start your web browser with a Jupyter Lab session ready. Download the notebooks to your machine, and you can open and run them locally on your machine.