pommevilla

tinytable

Simple and Customizable Tables in `R`

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

serotypesOfConcern

All code for manuscript 'Identifying a List of Salmonella Serotypes of Concern to Target for Reducing Risk of Salmonellosis'

pyseer

SEER, reimplemented in python 🐍🔮

xscast

screencasts of windows with list of keystrokes overlayed

advent-of-code-2023

I've given up, it's gonna be Python this year

gubbins

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

advent-of-code

My Advent of Code submissions. For 2021 and before, these are the original code I used, without any modifications after-the-fact. As such, they are probably not as efficient or short as they should be, because I want a working solution faster, not a better solution. For 2022 and after, these are the solutions uploaded to my YouTube channel.

Modern-CPP-Programming

Modern C++ Programming Course (C++03/11/14/17/20/23/26)

qPCR_data_processor

maldi_amr

Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"

leidenalg

Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.

great-tables

Make awesome display tables using Python.

orfipy

Fast and flexible ORF finder

wolt-python-package-cookiecutter

Cookiecutter for rapidly creating modern & high-quality Python packages

gggenomes

A grammar of graphics for comparative genomics

smk-simple-slurm

A simple Snakemake profile for Slurm without --cluster-config

KMC

Fast and frugal disk based k-mer counter

mercat2

MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data

eleventy-starter-ghost

A starter template to build websites with Ghost & Eleventy

video-game-review-analysis

Classification and topic analysis of video game reviews, trained on Steam user reviews.

drkostas

nf

binary_search_tree

Binary Search Tree Project Odin Project

reflex-examples

A repository full of Reflex example apps.

resume.github.com

Resumes generated using the GitHub informations

Wirt_Hm

Code and data associated with an exhaustive search for homomorphisms to finite Coxeter groups for knots with 16 or fewer crossings

evaluatePCR

An R package to evaluate PCR results

tidymodels

Easily install and load the tidymodels packages

sc2-build-order