pommevilla

resume.github.com

Resumes generated using the GitHub informations

Modern-CPP-Programming

Modern C++ Programming Course (C++03/11/14/17/20/23/26)

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

great-tables

Make awesome display tables using Python.

tidymodels

Easily install and load the tidymodels packages

leidenalg

Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.

gggenomes

A grammar of graphics for comparative genomics

reflex-examples

A repository full of Reflex example apps.

eleventy-starter-ghost

A starter template to build websites with Ghost & Eleventy

advent-of-code

My Advent of Code submissions. For 2021 and before, these are the original code I used, without any modifications after-the-fact. As such, they are probably not as efficient or short as they should be, because I want a working solution faster, not a better solution. For 2022 and after, these are the solutions uploaded to my YouTube channel.

KMC

Fast and frugal disk based k-mer counter

wolt-python-package-cookiecutter

Cookiecutter for rapidly creating modern & high-quality Python packages

xscast

screencasts of windows with list of keystrokes overlayed

tinytable

Simple and Customizable Tables in `R`

gubbins

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

smk-simple-slurm

A simple Snakemake profile for Slurm without --cluster-config

pyseer

SEER, reimplemented in python 🐍🔮

drkostas

orfipy

Fast and flexible ORF finder

maldi_amr

Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"

mercat2

MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data

sc2-build-order

video-game-review-analysis

Classification and topic analysis of video game reviews, trained on Steam user reviews.

advent-of-code-2023

I've given up, it's gonna be Python this year

binary_search_tree

Binary Search Tree Project Odin Project

evaluatePCR

An R package to evaluate PCR results

nf

qPCR_data_processor

serotypesOfConcern

All code for manuscript 'Identifying a List of Salmonella Serotypes of Concern to Target for Reducing Risk of Salmonellosis'

Wirt_Hm

Code and data associated with an exhaustive search for homomorphisms to finite Coxeter groups for knots with 16 or fewer crossings