pommevilla / MetaFunPrimer

A qPCR primer design pipeline to target environmentally abundant functional genes

Home Page:https://metafunprimer.readthedocs.io/en/latest/

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mfpcount: add threshold argument

pommevilla opened this issue · comments

while getopts ":hi:o:b:e:-:" opt; do

The current implementation of mfpcount just uses 0.80 as the cumulative threshold cutoff. Add an argument for the user to choose their cumulative thresholding value.

  • Add a short option -t
  • Add a long option --threshold
  • The default threshold value is 0.80.

Affected files:

  • mfpcount