Dennis Simpson's repositories
hatchet
HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.
Language:PythonBSD-3-Clause000
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nfsim
A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
Language:C++GPL-3.0000
setup-template-cython
Setuptools-based `setup.py` template for Cython projects
Language:PythonUnlicense000
VCF_Analysis
Collection of tools to analyze svABA data
Language:PythonMIT000
Volundr_GUI
User interface for writing Volundr options file.
Volur
Single Cell Sequencing Analysis
Language:PythonMIT000