Patrick Kimes's repositories
benchmark-fdr
Benchmarking study of recent covariate-adjusted FDR methods
spliceclust
visualization tools for exon/junction coverage
benchmark-fdr-html
Additional files for FDR benchmarking paper
PR2019replicathon
Replicability Hackathon, IQ BIO REU (UPR-RP)
bidmc-datathon
Materials for the BIDMC datathon (Sat 29 Feb 2020)
Language:Jupyter NotebookMIT000
book
Compiled and pretty version of labs
000
dfci-introR
Code and data for DFCI seminar - Introduction to R and RStudio
edx_adv_bioc
course development, adv bioc
labs
Rmd source files for the HarvardX series PH525x
Language:RMIT000
notebooks
Notebooks and resources for the Tokyo Datathon 2023
Language:Jupyter NotebookMIT000
pkimes.github.io
personal site remade using blogdown/hugo
pyNBS
Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)
Language:Jupyter NotebookMIT000
rafalab.github.io
web page