Peter Briggs's repositories
fedora-rpms-bioinf
Spec files and resources for building Fedora RPMS
galaxy-admin-utils
Utility scripts for working with local instances of Penn State's Galaxy platform http://wiki.galaxyproject.org/
ansible-palfinder-galaxy
Ansible playbooks for deploying BCF-managed Galaxy instances on UoM VMs
mock-utils
Utility scripts for building RPMs using mock
Amplicon_analysis-galaxy
Galaxy tools for Mauro Tutino's microbiome pipeline scripts https://github.com/MTutino/Amplicon_analysis
bioinf-software-install
Scripts to help with building and deploying bioinformatics software
fedora-rpms-verdurin
RPM Packaging work for Fedora
scripting-and-programming
Notes and recipes for scripting and programming
AAFC-Galaxy
Galaxy tool wrappers, tool dependencies, and workflows.
arqvist
Utility to explore and curate NGS data
auto_process-extras
Experimental utility scripts to supplement auto_process_ngs
bgruening-galaxytools
Galaxy Tool wrappers
bioconda-recipes
Conda recipes for the bioconda channel.
cargo-port
cache packages permanently
CRAFT-GP-galaxy
Galaxy tools to wrap the CRAFT-GP pipeline
dapars
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
download_archive
Storage of 3rd-party tarballs etc
galaxy-hub
Galaxy project website, aka Galaxy Community Hub
genomics-update-qc-reports
Making improvements to the reports from the QC pipeline in the genomics repository
lparsons-galaxy_tools
Wrappers for galaxy tools
pal_filter
Program to pick optimum loci from the output of pal_finder_v0.02.04 This program can be used to filter output from pal_finder and choose the 'optimum' loci. For the paper referencing this workflow, see Griffiths et al. (unpublished as of 15/02/2016) (sarah.griffiths-5@postgrad.manchester.ac.uk)
tools-devteam
Contains a set of Galaxy Tools mostly written by the Galaxy Team.
tools-iuc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission