pintoa1-mskcc's repositories

NeoSV

A computational workflow to identify neoantigens from structural variations (SVs)

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ComplexHeatmap_mskcc

Make Complex Heatmaps

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fusion-report

Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.github.io/fusion-report/example/

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gridss_virusbreakend

GRIDSS: the Genomic Rearrangement IDentification Software Suite (mskcc)

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pluto-cwl

CWL workflows for helix filter scripts

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kraken2

The second version of the Kraken taxonomic sequence classification system

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