pimbongaerts

radseq

Collection of Python scripts for parsing/analyses of RAD-seq data

firefish

Underwater sonar/USBL interface for photogrammetry surveys.

altimeter

Underwater sonar/USBL interface for photogrammetry surveys. PCB design files and Arduino code.

bermuda-rad

Electronic notebook for "Deep reefs are not universal refuges: reseeding potential varies among coral species" (Science Advances, 2017)

mesophotic

Ruby on Rails application to host scientific information on mesophotic coral ecosystems

monitoring

Repository for the lab's long-term temperature data

pachyseris

Electronic notebook for "Morphological stasis masks ecologically divergent coral species on tropical reefs" (Current Biology, 2021)

pimbongaerts.github.io

reefscape

Collection of Python scripts based on Metashape API and Open3D for parsing of photogrammetry data

framer

workflow

Dotfiles, installs, configurations and short-cuts