phcerdan

vtkImGuiAdapter

Adapter to add imgui to an existing vtkRenderWindow using SDL2.

configuration_files

My configuration files, including dot_files, vim, and scripts.

KitwareBeamerMetropolis

SGEXT

Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them completely in-silico. Used at least in biopolymers simulations and vascular networks.

ITKIsotropicWavelets

External Module for ITK, implementing Isotropic Wavelets and Riesz Filter for multiscale phase analysis.

insightjournal-dev

Insightjournal development scripts

deep-reinforcement-learning

Repo for the Deep Reinforcement Learning Nanodegree program

DGtal

Digital Geometry Tools and Algorithm Library

DiT

Official PyTorch Implementation of "Scalable Diffusion Models with Transformers"

eigen

Third-party Eigen library used internally in ITK. Offical upstream repository at https://gitlab.com/libeigen/eigen

freesurfer

Neuroimaging analysis and visualization suite

glove80-zmk-config

InsightJournal

Insight Journal

ITK

Insight Segmentation and Registration Toolkit -- Mirror

ITKDoxygen

ITK Doxygen nightly built with GitHub Actions and published to GitHub Pages

ITKTotalVariation

External Module for Total Variation Algorithms, providing wrap for https://github.com/albarji/proxTV

kaggle-HuBMAP

HuBMAP - Hacking the Human Vasculature (Kaggle Competition)

kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

lapack

LAPACK development repository

magma-nvim

Interact with Jupyter from NeoVim.

mdai-utils

Utility functions for MD.ai. Download and upload 2D and 3D segmentation images.

neurodocker

Generate custom Docker and Singularity images, and minimize existing containers

non-stationary_texture_syn

Code used for texture synthesis using GAN

open_spiel

OpenSpiel is a collection of environments and algorithms for research in general reinforcement learning and search/planning in games.

Pluribus

pthread-win32

clone / cvs-import of pthread-win32 + local tweaks (including MSVC2008 - MSVC2019 project files)

scikit-build

Improved build system generator for CPython C, C++, Cython and Fortran extensions

stylegan3

Official PyTorch implementation of StyleGAN3

SynthSeg

Contrast-agnostic segmentation of MRI scans

vimspector

vimspector - A multi-language debugging system for Vim