pgunn

model-infrastructures

Descriptions of model infrastructures, useful for SRE/NRE/... education

mongoe

Mongo Endpoint (this is not a product from MongoDB Inc)

virtual_cto

Premade infrastructure and technology decisions a tech-dependent company might use as decision defaults

CaImAn

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

aggregate

caiman-feedstock

A conda-smithy repository for caiman.

CATMAID

Collaborative Annotation Toolkit for Massive Amounts of Image Data

ChromA

Chromatin Accessibility Annotation Tool

cloud-volume

Client for reading and writing to Neuroglancer Precomputed volumes on cloud services.

conda

OS-agnostic, system-level binary package manager and ecosystem

conda-docs

Conda documentation

conda-forge-pinning-feedstock

A conda-smithy repository for conda-forge-pinning.

dbinfer

Summarise a DB, infer table relationships based on analysis

diced

Interface that allows versioned access to cloud-backed nD datasets.

dlight

My minecraft texture pack

donjon

A Zorklike engine for Android

dvid

Distributed, Versioned, Image-oriented Dataservice

dws

Dachte Web Service

ffmpeg-feedstock

A conda-smithy repository for ffmpeg.

ffn

Flood-Filling Networks for instance segmentation in 3d volumes.

flypylib

flyem python library for synapse/object detection

igneous

Python based pipeline for Downsampling, Mesh, Remapping, and more. Originally by Nacho and Will.

neuclease

Tools for computing interactive "cleaves" of agglomerated neuron fragments from a DVID server.

numpy

Numpy main repository

pound

Automatically exported from code.google.com/p/pound

psplay

Perfect Splayer

theano-feedstock

A conda-smithy repository for theano.

tildebin

Random useless scripts for your ~/bin

trimesh

Python library for loading and using triangular meshes.

z5

Lighweight C++ and Python interface for datasets in zarr and N5 format