pgm

kubeque

A batch compute submission tool utilizing google's GKE and other services

advent-of-code

Thought I'd try the advent of code for fun this year

pliant

An experimental FUSE filesystem for scatter/gather parallelized workloads utilizing cloud object stores for persistence

pyright-ratchet

aws-watchdog

estimate cost of running instances

banana-sushi

A reverse proxy bundled with control plane for starting up services on demand (including VM provisioning)

ceres

Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens

dalmatian

dalmatian is a collection of high-level companion functions for Firecloud and FISS.

doublestar

Implements support for double star (**) matches in golang's path.Match and filepath.Glob.

fake-s3

A lightweight server clone of Amazon S3 that simulates most of the commands supported by S3 with minimal dependencies

flock

a lightweight library for managing scatter/gather jobs run on a job scheduler such as SGE or LSF

goconseq

hermes

Python LL(1) Parser Generator with Expression Parsing

homebrew-cask

A CLI workflow for the administration of Mac applications distributed as binaries

jitsi-ansible

Ansible playbook to set up ubuntu 18 host with jitsi for waw-rooms install

json-editor

JSON Schema Based Editor

muddy

Mud-like video conferencing web app written in Go for fun

oauth2_proxy

A reverse proxy that provides authentication with Google, Github or other provider

poor-profile-py

A simple line execution profiler which enables profiling on a per-function basis

puFS

Yet another attempt at distributed filesystem for batch processing backed by cloud storage

pufs-sim

A python discrete event simulator implemented atop threads

python-flamegraph

Statistical profiler which outputs in format suitable for FlameGraph (http://www.brendangregg.com/flamegraphs.html)

shepherd

a standalone go executable for running batch jobs, pulling inputs from GCS and uploading results afterwards

singleply

StarCluster

StarCluster is an open source cluster-computing toolkit for Amazon's Elastic Compute Cloud (EC2).

synapsePythonClient

Programmatic interface to Synapse services for Python

telimed

telimed demo using jitsi

treeply

typesheet

An experimental typed spreadsheet-like database

wdl

Workflow Description Language - Specification and Implementations