petersenpeter

CellExplorer

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

phy2-plugins

Plugins for Phy2

phy1-plugins

Plugins to Phy1 - additional features to Phy

Code_Petersen_Buzsaki_Neuron_2020

KilosortWrapper

3D-Printing

buzcode

Code for internal lab sharing - polishing has started but is by no means complete

Code_Petersen_Voroslakos_JNP_2022

This is the code for: Brain temperature affects quantitative features of hippocampal sharp wave ripples. Peter C. Petersen, Mihály Vöröslakos, György Buzsáki. Journal of Neurophysiology, April 2022.

common_resources

django-admin-display-fields-settings

Django application. The application adds in the admin form to control the views column.

django-admin-json-editor

Adds json-editor for JSONField in Django Administration

django-bulk-admin

Django bulk admin enables you to bulk add, bulk edit, bulk upload and bulk select in django admin.

django-jet

Django-3 compatible version of django-jet. Modern responsive template for the Django admin interface with improved functionality.

just-the-docs

A modern, high customizable, responsive Jekyll theme for documention with built-in search.

Kilosort2

Fast spike sorting with drift correction for up to a thousand channels

klustakwik

UNMAINTAINED - use klusta instead

ndx-cell-explorer

petersen-lab-matlab

Matlab code for the PetersenLab at UCPH

phy

Modules for manual spike sorting GUIs, ephys data analysis, visualization

phy-contrib

Manual spike sorting GUIs for klusta and template matching

sortingQuality

Functions to assess quality of spike sorting results