petermr / openVirus

aggregation of scholarly publications and extracted knowledge on viruses and epidemics.

petermr/openVirus Issues

Double Backslash problem in Windows - Jupyter Notebook
Updated 4 years ago2
Data tables created from `ami search` doesn't direct to right Wikipedia links to terms, most of the times.
Updated 4 years ago
For getpapers:- "Dockerfile: cannot find the file specified."
Updated 4 years ago25
Unable to install getpapers
Closed 4 years ago2
Urdu fonts are missing
Updated 4 years ago1
Problem running getpapers on Docker
Updated 4 years ago6
no results in ami search
Updated 4 years ago
ami search: reads the customised dictionary improperly
Updated 4 years ago
create ami commands for datatables and cooccurrence
Updated 4 years ago
ami search: 'OutOfMemoryError'
Closed 4 years ago18
Git Desktop: fatal: the remote end hung up unexpectedly
Closed 4 years ago2
ami search: some files empty for customized dictionary
Updated 4 years ago14
'exit status 1 : not recognised as operable program or batch file' : nvm installation
Closed 4 years ago1
amidict syntax : input file is taken as <dictionary title>
Closed 4 years ago13
SPARQL2ami : needed amidict syntax for dictionary creation
Closed 4 years ago4
_cooccurence folder formed by ami-search contains empty subfolders
Closed 4 years ago4
getpapers fetching papers timeout issue
Updated 4 years ago1
`ami3` `picocli` parsing error creates `ClassCastException`
Updated 4 years ago5
ami search
Closed 4 years ago2
Empty XML 'count' and 'documents' files output by AMISearch
Updated 4 years ago1
Blogpost for GenR and FORCE11
Updated 4 years ago1
amidict ingest SPARQL search
Updated 4 years ago
amidict merge
Updated 4 years ago
getpapers FATAL ERROR when downloading 30k articles or more
Updated 4 years ago9
Switching docker to Windows container in Windows 10 pro
Updated 4 years ago
getpapers "exact phrase" queries not working.
Updated 4 years ago2
Problem installing ami3
Closed 4 years ago1
getpapers "download text-mined terms" not working?
Updated 4 years ago
Running `amidict` or `ami-dictionary` in Windows 10
Updated 4 years ago21
Problem in creating dictionary using `ami-dictionary`
Updated 4 years ago1
getpapers error: "the syntax of the command is incorrect"
Updated 4 years ago8
Copying 'ContentMine folder' onto desktop for 'AMI' installation in Windows 10
Closed 4 years ago5
Problem running Medrxiv in windows 10
Updated 4 years ago6
problem installing nvm-setup for getpapers
Closed 4 years ago6
NPE in `AMI.execute` without subcommand
Updated 4 years ago4
"Make"-like facility in `AMI`
Updated 4 years ago
Installing getpapers ami for use on OCKProject
Updated 4 years ago4
Problem installing `Node.js` for `getpapers`
Updated 4 years ago11
amidict --dictionary argument has no effect
Updated 4 years ago
Testing medrxiv python/ferret downloader
Updated 4 years ago21
Medicinal chemistry extraction
Updated 4 years ago1
Data visualisation
Updated 4 years ago16
BiorxivDownload fails to create correct hit lists (URGENT)
Updated 4 years ago
AMIPDFTool fails to parse commandline / options
Updated 4 years ago
AMICleanTest.testCleanForestPlotsSmall fails on unzipping
Updated 4 years ago
NullPointerException in AMIGetpapersTool
Closed 4 years ago1
getpapers error when outputting mined terms summary
Updated 4 years ago
Documenting Testing Expanding AMIDownload
Updated 4 years ago5
`ami-download` and `AMIDownloadTool.runCommands(args) behave differently
Updated 4 years ago1
`ami download` and `ami-download` behave differently
Updated 4 years ago