peterdfields's repositories
Angst_etal_2022_MolEcol
Scripts used in Angst et al. (2022)
Angst_etal_2023_G3
Scripts used in Angst et al. (2023)
arabidopsis_numt-1
Analysis of Arabidopsis thaliana Chromosome 2 numt
Bash-Oneliner
A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.
cs-nf-pipelines
The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines
deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
graph_peak_caller
ChIP-seq peak caller for reads mapped to a graph-based reference genome
latex-nihbiosketch
A LaTeX class implementing the new NIH Biographical Sketch Format
rna-seq-pop
Snakemake workflow for Illumina RNA-sequencing experiments, including variant calling and more - relating to population genetics and insecticide resistance