pepkit / pepdbagent

Database for storing sample metadata

pepdbagent

pepdbagent is a Python library and toolkit that gives a user-friendly interface to connect, upload, update and retrieve information from pep-db.

pep-db is a postgres database created for storing PEPs. It is a backend database for PEPhub.

Before using pepdbagent, you should install or have access to a pep-db instance.

To run a pep-db instance, you can use this tutorial:

• pep-db installation

Then, follow the pepdbagent tutorial here:

• pedbagent