pepkit / BiocProject

BiocProject provides a PEP-compatible R package for autoloading biological data

http://code.databio.org/BiocProject/

pepkit/BiocProject Issues

`..` data.table notation not recognized within `BiocProject` calls
Updated 4 years ago
update to comply with new piface spec
Closed 4 years ago
pipeline interface vignette
Closed 5 years ago
unit tests for pipeline interface
Closed 5 years ago
Extending pipeline interface capability
Closed 5 years ago1
samples function and generics
Updated 5 years ago5
Allowing data parsing functions in the pipeline interface
Closed 5 years ago4
biocproject uses the wrong function
Closed 5 years ago3
make the "incorrect object type" warning message more informative
Closed 5 years ago
handling non-Annotated function returns
Closed 5 years ago
show method should always be redefined
Closed 5 years ago1
biocproject should not bail on pepr warning
Closed 5 years ago1
update changelog to pkgdown format
Closed 5 years ago3
error running vignette
Closed 5 years ago4
BiocCheck results
Closed 5 years ago2
unit tests and checks
Closed 5 years ago3
passing funcArgs in the yaml file
Closed 5 years ago2
attaching biocproject with onload
Updated 5 years ago
can we access the show method?
Closed 5 years ago8
What if the read data function does not return an Annotated?
Closed 5 years ago1
Using BiocProject without loading the package
Closed 5 years ago4
New class for returning error objects?
Closed 5 years ago7
Error in .insertPEP function
Closed 5 years ago1
Correct vignettes and document code
Closed 5 years ago
BiocProject won't display warnings and errors
Closed 5 years ago
vignette links
Closed 5 years ago
using a function in a different package
Closed 5 years ago3
lamba vs anonymous terminology
Closed 6 years ago
capturing errors
Closed 6 years ago
vignette function path is incorrect
Closed 6 years ago3
Example PEP for vignette
Closed 6 years ago2
vignette feedback
Closed 6 years ago2
using anonymous functions for autoload
Closed 6 years ago