peekxc

clustertree

A standalone, scalable, and extensible R package for estimating the empirical cluster tree.

TDAmapper

(R package) Analyze High-Dimensional Data Using Discrete Morse Theory

pixiplex

R package for visualizing and interacting with simplicial complexes

tallem

coverr

Provides a few covering methods for point cloud data

procplex

BayesianML

Bayesian Equivalents to popular Machine Learning algorithms

collabyrinth

Labyrinth generator

adjclust

Adjacency-constrained hierarchical clustering of a similarity matrix

Cover-Tree

A well-documented C++ implementation of the cover tree datastructure for quick k-nearest-neighbor search. Allows single-point insertion and removal. Uses templates.

dart

Tools for simulating dynamic persistence

DAYMUNC

dplex

dplex_paper

ggtda

ggplot-2 compatible package to visualize persistent homology.

grapher

Wrapper R package for Grapher.js

IndexedMapper

Source code for efficiently computing Mapper at multiple scales

landmark

procedures to generate landmark sets from finite metric spaces

leaflet.mapbox

Mapbox.js Support for Leaflet Widget

manim_plex

Animations w/ manim

POI_Discovery

Set of reproducible scripts for performing POI discovery on large spatial trajectory data sources

pysparse

A Sparse Matrix Library for Python

seb

Smallest enclosing ball - R package

Simpers

R wrapper for the Simpers package

slate

Beautiful static documentation for your API

TDAstats

R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.

test-data

for data.table issue

Utilities

My storage repository for miscellaneous scripts that come in handy

whiteglass

Minimal, responsive Jekyll theme for hackers